3D structure

PDB id
6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
4.5 Å

Loop

Sequence
UGA*UGACUGCC*GGAGGAAGGUG
Length
22 nucleotides
Bulged bases
6HTQ|1|a|U|1192
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6HTQ|1|a|U|1126
6HTQ|1|a|G|1127
6HTQ|1|a|A|1128
*
6HTQ|1|a|U|1164
6HTQ|1|a|G|1165
6HTQ|1|a|A|1166
6HTQ|1|a|C|1167
6HTQ|1|a|U|1168
6HTQ|1|a|G|1169
6HTQ|1|a|C|1170
6HTQ|1|a|C|1171
*
6HTQ|1|a|G|1183
6HTQ|1|a|G|1184
6HTQ|1|a|A|1185
6HTQ|1|a|G|1186
6HTQ|1|a|G|1187
6HTQ|1|a|A|1188
6HTQ|1|a|A|1189
6HTQ|1|a|G|1190
6HTQ|1|a|G|1191
6HTQ|1|a|U|1192
6HTQ|1|a|G|1193

Current chains

Chain a
16S rRNA

Nearby chains

Chain b
30S ribosomal protein S2
Chain i
30S ribosomal protein S9
Chain j
30S ribosomal protein S10
Chain n
30S ribosomal protein S14

Coloring options:

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