J3_6I7O_066
3D structure
- PDB id
- 6I7O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- CUUAAUUUG*CGGGGAAACUCAC*GGCCG
- Length
- 27 nucleotides
- Bulged bases
- 6I7O|1|2|G|1199, 6I7O|1|2|G|1201, 6I7O|1|2|A|1203, 6I7O|1|2|A|1204
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6I7O|1|2|C|1180
6I7O|1|2|U|1181
6I7O|1|2|U|1182
6I7O|1|2|A|1183
6I7O|1|2|A|1184
6I7O|1|2|U|1185
6I7O|1|2|U|1186
6I7O|1|2|U|1187
6I7O|1|2|G|1188
*
6I7O|1|2|C|1197
6I7O|1|2|G|1198
6I7O|1|2|G|1199
6I7O|1|2|G|1200
6I7O|1|2|G|1201
6I7O|1|2|A|1202
6I7O|1|2|A|1203
6I7O|1|2|A|1204
6I7O|1|2|C|1205
6I7O|1|2|U|1206
6I7O|1|2|C|1207
6I7O|1|2|A|1208
6I7O|1|2|C|1209
*
6I7O|1|2|G|1454
6I7O|1|2|G|1455
6I7O|1|2|C|1456
6I7O|1|2|C|1457
6I7O|1|2|G|1458
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain E
- 40S ribosomal protein S15
- Chain F
- 40S ribosomal protein S16-A
- Chain H
- 40S ribosomal protein S18-A
- Chain J
- 40S ribosomal protein S20
- Chain M
- 40S ribosomal protein S29-A
- Chain N
- Ubiquitin-40S ribosomal protein S31
Coloring options: