J3_6I7V_019

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UG*UGUUG*CGCAA

Length

12 nucleotides

Bulged bases

6I7V|1|BA|U|1086

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6I7V_019 not in the Motif Atlas

Homologous match to J3_5J7L_009

Geometric discrepancy: 0.1305

The information below is about J3_5J7L_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76043.3

Basepair signature

cWW-cWW-tSS-F-F-F-F-cWW

Number of instances in this motif group

3

Unit IDs

6I7V|1|BA|U|1073
6I7V|1|BA|G|1074
*
6I7V|1|BA|U|1083
6I7V|1|BA|G|1084
6I7V|1|BA|U|1085
6I7V|1|BA|U|1086
6I7V|1|BA|G|1087
*
6I7V|1|BA|C|1098
6I7V|1|BA|G|1099
6I7V|1|BA|C|1100
6I7V|1|BA|A|1101
6I7V|1|BA|A|1102

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BB

30S ribosomal protein S2

Chain BE

30S ribosomal protein S5