J3_6I7V_082
3D structure
- PDB id
- 6I7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosomal protein paralogs bL31 and bL36
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CCUG*CGAUAGUGAACCAGUAC*GGAAAG
- Length
- 27 nucleotides
- Bulged bases
- 6I7V|1|CA|U|34, 6I7V|1|CA|U|448, 6I7V|1|CA|C|456
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6I7V_082 not in the Motif Atlas
- Homologous match to J3_5J7L_067
- Geometric discrepancy: 0.1604
- The information below is about J3_5J7L_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_30040.2
- Basepair signature
- cWW-tWH-F-cWW-tSS-tHH-cSS-tWH-tSW-tHS-cWW-tWH-F-cSH-tSS-F-F
- Number of instances in this motif group
- 7
Unit IDs
6I7V|1|CA|C|32
6I7V|1|CA|C|33
6I7V|1|CA|U|34
6I7V|1|CA|G|35
*
6I7V|1|CA|C|445
6I7V|1|CA|G|446
6I7V|1|CA|A|447
6I7V|1|CA|U|448
6I7V|1|CA|A|449
6I7V|1|CA|G|450
6I7V|1|CA|U|451
6I7V|1|CA|G|452
6I7V|1|CA|A|453
6I7V|1|CA|A|454
6I7V|1|CA|C|455
6I7V|1|CA|C|456
6I7V|1|CA|A|457
6I7V|1|CA|G|458
6I7V|1|CA|U|459
6I7V|1|CA|A|460
6I7V|1|CA|C|461
*
6I7V|1|CA|G|468
6I7V|1|CA|G|469
6I7V|1|CA|A|470
6I7V|1|CA|A|471
6I7V|1|CA|A|472
6I7V|1|CA|G|473
Current chains
- Chain CA
- 23S ribsomal RNA
Nearby chains
- Chain C3
- 50S ribosomal protein L34
- Chain CE
- 50S ribosomal protein L4
- Chain CR
- 50S ribosomal protein L20
- Chain CU
- 50S ribosomal protein L23
Coloring options: