J3_6IP5_032
3D structure
- PDB id
- 6IP5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CAGUC*GUGCG*CGACG
- Length
- 15 nucleotides
- Bulged bases
- 6IP5|1|1A|C|704, 6IP5|1|1A|C|1295
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6IP5|1|1A|C|451
6IP5|1|1A|A|452
6IP5|1|1A|G|453
6IP5|1|1A|U|454
6IP5|1|1A|C|455
*
6IP5|1|1A|G|701
6IP5|1|1A|U|702
6IP5|1|1A|G|703
6IP5|1|1A|C|704
6IP5|1|1A|G|705
*
6IP5|1|1A|C|1292
6IP5|1|1A|G|1293
6IP5|1|1A|A|1294
6IP5|1|1A|C|1295
6IP5|1|1A|G|1296
Current chains
- Chain 1A
- 28S ribosomal RNA
Nearby chains
- Chain 1H
- 60S ribosomal protein L6
- Chain 2Y
- 60S ribosomal protein L32
- Chain 2Z
- 60S ribosomal protein L35a
- Chain 2k
- 60S ribosomal protein L28
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