J3_6LKQ_027
3D structure
- PDB id
- 6LKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UAGAAU*GGAAUACCGGUGG*CGG
- Length
- 22 nucleotides
- Bulged bases
- 6LKQ|1|s|U|723
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6LKQ|1|s|U|672
6LKQ|1|s|A|673
6LKQ|1|s|G|674
6LKQ|1|s|A|675
6LKQ|1|s|A|676
6LKQ|1|s|U|677
*
6LKQ|1|s|G|713
6LKQ|1|s|G|714
6LKQ|1|s|A|715
6LKQ|1|s|A|716
6LKQ|1|s|U|717
6LKQ|1|s|A|718
6LKQ|1|s|C|719
6LKQ|1|s|C|720
6LKQ|1|s|G|721
6LKQ|1|s|G|722
6LKQ|1|s|U|723
6LKQ|1|s|G|724
6LKQ|1|s|G|725
*
6LKQ|1|s|C|732
6LKQ|1|s|G|733
6LKQ|1|s|G|734
Current chains
- Chain s
- 16S ribosomal RNA
Nearby chains
- Chain E
- 30S ribosomal protein S6
- Chain J
- 30S ribosomal protein S11
- Chain N
- 30S ribosomal protein S15
- Chain Q
- 30S ribosomal protein S18
- Chain T
- 30S ribosomal protein S21
- Chain U
- 50S ribosomal protein L2
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