J3_6LQU_005
3D structure
- PDB id
- 6LQU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 90S small subunit preribosomes in transition states (State A1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAGAC*GGGUGG*CUUG
- Length
- 15 nucleotides
- Bulged bases
- 6LQU|1|SA|G|1218, 6LQU|1|SA|U|1443
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6LQU|1|SA|C|1216
6LQU|1|SA|A|1217
6LQU|1|SA|G|1218
6LQU|1|SA|A|1219
6LQU|1|SA|C|1220
*
6LQU|1|SA|G|1263
6LQU|1|SA|G|1264
6LQU|1|SA|G|1265
6LQU|1|SA|U|1266
6LQU|1|SA|G|1267
6LQU|1|SA|G|1268
*
6LQU|1|SA|C|1441
6LQU|1|SA|U|1442
6LQU|1|SA|U|1443
6LQU|1|SA|G|1448
Current chains
- Chain SA
- 18S pre-rRNA
Nearby chains
- Chain RG
- Ribosomal RNA small subunit methyltransferase NEP1
- Chain RN
- Nucleolar complex protein 14
- Chain RS
- Essential nuclear protein 1
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