J3_6LU8_010

3D structure

PDB id

6LU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-60S ribosomal subunit - state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

6LU8|1|2|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LU8|1|2|A|2551
6LU8|1|2|G|2552
6LU8|1|2|A|2553
6LU8|1|2|U|2554
6LU8|1|2|G|2555
*
6LU8|1|2|C|2572
6LU8|1|2|A|2573
6LU8|1|2|G|2574
6LU8|1|2|U|2575
*
6LU8|1|2|A|2757
6LU8|1|2|G|2758
6LU8|1|2|G|2759
6LU8|1|2|G|2760
6LU8|1|2|U|2761
6LU8|1|2|G|2762
6LU8|1|2|U|2763
6LU8|1|2|A|2764
6LU8|1|2|A|2765
6LU8|1|2|A|2766
6LU8|1|2|U|2767

Current chains

Chain 2

28S rRNA

Nearby chains

Chain i

60S ribosomal protein L27