J3_6M62_014
3D structure
- PDB id
- 6M62 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUCAU*AGUAGAAC*GUAAAAG
- Length
- 20 nucleotides
- Bulged bases
- 6M62|1|1|A|2703
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6M62|1|1|C|2664
6M62|1|1|U|2665
6M62|1|1|C|2666
6M62|1|1|A|2667
6M62|1|1|U|2668
*
6M62|1|1|A|2686
6M62|1|1|G|2687
6M62|1|1|U|2688
6M62|1|1|A|2689
6M62|1|1|G|2690
6M62|1|1|A|2691
6M62|1|1|A|2692
6M62|1|1|C|2693
*
6M62|1|1|G|2700
6M62|1|1|U|2701
6M62|1|1|A|2702
6M62|1|1|A|2703
6M62|1|1|A|2704
6M62|1|1|A|2705
6M62|1|1|G|2706
Current chains
- Chain 1
- RDN25-1 rRNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain D
- 60S ribosomal protein L5
- Chain J
- 60S ribosomal protein L11-A
- Chain v
- Ribosome biogenesis protein RPF2
Coloring options: