J3_6MTB_011

3D structure

PDB id

6MTB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

6MTB|1|5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTB|1|5|A|2551
6MTB|1|5|G|2552
6MTB|1|5|A|2553
6MTB|1|5|U|2554
6MTB|1|5|G|2555
*
6MTB|1|5|C|2572
6MTB|1|5|A|2573
6MTB|1|5|G|2574
6MTB|1|5|U|2575
*
6MTB|1|5|A|2757
6MTB|1|5|G|2758
6MTB|1|5|G|2759
6MTB|1|5|G|2760
6MTB|1|5|U|2761
6MTB|1|5|G|2762
6MTB|1|5|U|2763
6MTB|1|5|A|2764
6MTB|1|5|A|2765
6MTB|1|5|A|2766
6MTB|1|5|U|2767

Current chains

Chain 5

28S rRNA

Nearby chains

Chain Z

60S ribosomal protein L27