J3_6MTB_025

3D structure

PDB id

6MTB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUG*UUCCG*CAAAG

Length

13 nucleotides

Bulged bases

6MTB|1|9|C|1138

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTB|1|9|C|1094
6MTB|1|9|U|1095
6MTB|1|9|G|1096
*
6MTB|1|9|U|1136
6MTB|1|9|U|1137
6MTB|1|9|C|1138
6MTB|1|9|C|1139
6MTB|1|9|G|1140
*
6MTB|1|9|C|1147
6MTB|1|9|A|1148
6MTB|1|9|A|1149
6MTB|1|9|A|1150
6MTB|1|9|G|1151

Current chains

Chain 9

18S rRNA

Nearby chains

Chain AA

40S ribosomal protein SA

Chain VV

40S ribosomal protein S21

Chain WW

40S ribosomal protein S15a

Chain aa

40S ribosomal protein S26

Chain bb

40S ribosomal protein S27