J3_6N1D_032
3D structure
- PDB id
- 6N1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UGGA*UAC*GGAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6N1D_032 not in the Motif Atlas
- Homologous match to J3_6CZR_019
- Geometric discrepancy: 0.2187
- The information below is about J3_6CZR_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6N1D|1|B16S|U|943
6N1D|1|B16S|G|944
6N1D|1|B16S|G|945
6N1D|1|B16S|A|946
*
6N1D|1|B16S|U|1235
6N1D|1|B16S|A|1236
6N1D|1|B16S|C|1237
*
6N1D|1|B16S|G|1337
6N1D|1|B16S|G|1338
6N1D|1|B16S|A|1339
6N1D|1|B16S|A|1340
Current chains
- Chain B16S
- 16S rRNA
Nearby chains
- Chain BPTN
- Transfer RNA; tRNA
- Chain BS09
- 30S ribosomal protein S9
- Chain BS13
- 30S ribosomal protein S13
- Chain BTHX
- 30S ribosomal protein Thx
Coloring options: