J3_6N8J_003
3D structure
- PDB id
- 6N8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AUC*GAGGACUGCG*CAAGGAU
- Length
- 20 nucleotides
- Bulged bases
- 6N8J|1|1|A|607
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6N8J|1|1|A|501
6N8J|1|1|U|502
6N8J|1|1|C|503
*
6N8J|1|1|G|588
6N8J|1|1|A|589
6N8J|1|1|G|590
6N8J|1|1|G|591
6N8J|1|1|A|592
6N8J|1|1|C|593
6N8J|1|1|U|594
6N8J|1|1|G|595
6N8J|1|1|C|596
6N8J|1|1|G|597
*
6N8J|1|1|C|606
6N8J|1|1|A|607
6N8J|1|1|A|608
6N8J|1|1|G|609
6N8J|1|1|G|610
6N8J|1|1|A|611
6N8J|1|1|U|612
Current chains
- Chain 1
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain E
- 60S ribosomal protein L6-A
- Chain F
- 60S ribosomal protein L7-A
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L33-A
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