J3_6N8J_021
3D structure
- PDB id
- 6N8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAC*GCUAAGGAGUG*CUCAC
- Length
- 19 nucleotides
- Bulged bases
- 6N8J|1|1|A|1263, 6N8J|1|1|G|1264
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6N8J|1|1|G|1230
6N8J|1|1|A|1231
6N8J|1|1|C|1232
*
6N8J|1|1|G|1256
6N8J|1|1|C|1257
6N8J|1|1|U|1258
6N8J|1|1|A|1259
6N8J|1|1|A|1260
6N8J|1|1|G|1261
6N8J|1|1|G|1262
6N8J|1|1|A|1263
6N8J|1|1|G|1264
6N8J|1|1|U|1265
6N8J|1|1|G|1266
*
6N8J|1|1|C|1275
6N8J|1|1|U|1276
6N8J|1|1|C|1277
6N8J|1|1|A|1278
6N8J|1|1|C|1279
Current chains
- Chain 1
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain K
- 60S ribosomal protein L12
- Chain W
- Ribosome assembly factor MRT4
- Chain r
- Ribosome biogenesis protein NSA2
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