J3_6NSH_038
3D structure
- PDB id
- 6NSH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Modified ASL proline bound to Thermus thermophilus 70S (near-cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CGC*GGACUGC*GAGGAAGGAG
- Length
- 20 nucleotides
- Bulged bases
- 6NSH|1|XA|A|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6NSH_038 not in the Motif Atlas
- Homologous match to J3_6CZR_025
- Geometric discrepancy: 0.2319
- The information below is about J3_6CZR_025
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17791.1
- Basepair signature
- cWW-cSH-cWW-cWH-tWH-tSW-cWW-tWS-F-cWW-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
6NSH|1|XA|C|1116
6NSH|1|XA|G|1117
6NSH|1|XA|C|1118
*
6NSH|1|XA|G|1155
6NSH|1|XA|G|1156
6NSH|1|XA|A|1157
6NSH|1|XA|C|1158
6NSH|1|XA|U|1159
6NSH|1|XA|G|1160
6NSH|1|XA|C|1161
*
6NSH|1|XA|G|1175
6NSH|1|XA|A|1176
6NSH|1|XA|G|1177
6NSH|1|XA|G|1178
6NSH|1|XA|A|1179
6NSH|1|XA|A|1180
6NSH|1|XA|G|1181
6NSH|1|XA|G|1182
6NSH|1|XA|A|1183
6NSH|1|XA|G|1184
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain QJ
- 30S ribosomal protein S10
- Chain XB
- 30S ribosomal protein S2
- Chain XI
- 30S ribosomal protein S9
- Chain XN
- 30S ribosomal protein S14 type Z
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