3D structure

PDB id
6NU2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
CUAAACCUAG*CAAUAGAUAUAGUAC*GGAAAGAUGAAAAAUUAUAACCAAG
Length
50 nucleotides
Bulged bases
6NU2|1|A|U|1774, 6NU2|1|A|U|1799, 6NU2|1|A|G|1800, 6NU2|1|A|A|1804, 6NU2|1|A|U|1806, 6NU2|1|A|U|1809, 6NU2|1|A|A|1810, 6NU2|1|A|A|1811, 6NU2|1|A|C|1812, 6NU2|1|A|C|1813
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6NU2|1|A|C|1672
6NU2|1|A|U|1673
6NU2|1|A|A|1674
6NU2|1|A|A|1675
6NU2|1|A|A|1676
6NU2|1|A|C|1677
6NU2|1|A|C|1678
6NU2|1|A|U|1679
6NU2|1|A|A|1680
6NU2|1|A|G|1681
*
6NU2|1|A|C|1771
6NU2|1|A|A|1772
6NU2|1|A|A|1773
6NU2|1|A|U|1774
6NU2|1|A|A|1775
6NU2|1|A|G|1776
6NU2|1|A|A|1777
6NU2|1|A|U|1778
6NU2|1|A|A|1779
6NU2|1|A|U|1780
6NU2|1|A|A|1781
6NU2|1|A|G|1782
6NU2|1|A|U|1783
6NU2|1|A|A|1784
6NU2|1|A|C|1785
*
6NU2|1|A|G|1792
6NU2|1|A|G|1793
6NU2|1|A|A|1794
6NU2|1|A|A|1795
6NU2|1|A|A|1796
6NU2|1|A|G|1797
6NU2|1|A|A|1798
6NU2|1|A|U|1799
6NU2|1|A|G|1800
6NU2|1|A|A|1801
6NU2|1|A|A|1802
6NU2|1|A|A|1803
6NU2|1|A|A|1804
6NU2|1|A|A|1805
6NU2|1|A|U|1806
6NU2|1|A|U|1807
6NU2|1|A|A|1808
6NU2|1|A|U|1809
6NU2|1|A|A|1810
6NU2|1|A|A|1811
6NU2|1|A|C|1812
6NU2|1|A|C|1813
6NU2|1|A|A|1814
6NU2|1|A|A|1815
6NU2|1|A|G|1816

Current chains

Chain A
16S rRNA

Nearby chains

Chain 0
39S ribosomal protein L32, mitochondrial
Chain 2
39S ribosomal protein L34, mitochondrial
Chain 9
39S ribosomal protein L41, mitochondrial
Chain F
39S ribosomal protein L4, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain T
39S ribosomal protein L22, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain V
39S ribosomal protein L24, mitochondrial
Chain Y
39S ribosomal protein L47, mitochondrial
Chain c
39S ribosomal protein L44, mitochondrial
Chain d
39S ribosomal protein L45, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial

Coloring options:

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