3D structure

PDB id
6NU3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
AAAAUUUAACACCCAU*AUUAAG*CAACACCAAAAAUCCCAAACAUAUAACU
Length
50 nucleotides
Bulged bases
6NU3|1|A|A|2154, 6NU3|1|A|U|2157, 6NU3|1|A|U|2158, 6NU3|1|A|U|2159, 6NU3|1|A|A|2160, 6NU3|1|A|A|2228, 6NU3|1|A|U|2233, 6NU3|1|A|C|2234, 6NU3|1|A|C|2235, 6NU3|1|A|C|2236, 6NU3|1|A|A|2243, 6NU3|1|A|U|2244
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6NU3|1|A|A|2153
6NU3|1|A|A|2154
6NU3|1|A|A|2155
6NU3|1|A|A|2156
6NU3|1|A|U|2157
6NU3|1|A|U|2158
6NU3|1|A|U|2159
6NU3|1|A|A|2160
6NU3|1|A|A|2161
6NU3|1|A|C|2162
6NU3|1|A|A|2163
6NU3|1|A|C|2164
6NU3|1|A|C|2165
6NU3|1|A|C|2166
6NU3|1|A|A|2167
6NU3|1|A|U|2168
*
6NU3|1|A|A|2192
6NU3|1|A|U|2193
6NU3|1|A|U|2194
6NU3|1|A|A|2195
6NU3|1|A|A|2196
6NU3|1|A|G|2197
*
6NU3|1|A|C|2212
6NU3|1|A|A|2213
6NU3|1|A|A|2214
6NU3|1|A|C|2215
6NU3|1|A|A|2216
6NU3|1|A|C|2217
6NU3|1|A|C|2218
6NU3|1|A|A|2228
6NU3|1|A|A|2229
6NU3|1|A|A|2230
6NU3|1|A|A|2231
6NU3|1|A|A|2232
6NU3|1|A|U|2233
6NU3|1|A|C|2234
6NU3|1|A|C|2235
6NU3|1|A|C|2236
6NU3|1|A|A|2237
6NU3|1|A|A|2238
6NU3|1|A|A|2239
6NU3|1|A|C|2240
6NU3|1|A|A|2241
6NU3|1|A|U|2242
6NU3|1|A|A|2243
6NU3|1|A|U|2244
6NU3|1|A|A|2245
6NU3|1|A|A|2246
6NU3|1|A|C|2247
6NU3|1|A|U|2248

Current chains

Chain A
16S rRNA

Nearby chains

Chain 4
39S ribosomal protein L36, mitochondrial
Chain E
39S ribosomal protein L3, mitochondrial
Chain I
39S ribosomal protein L10, mitochondrial
Chain J
39S ribosomal protein L11, mitochondrial
Chain K
39S ribosomal protein L13, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain S
39S ribosomal protein L21, mitochondrial
Chain Z
39S ribosomal protein L30, mitochondrial
Chain j
39S ribosomal protein L52, mitochondrial
Chain k
39S ribosomal protein L53, mitochondrial
Chain l
39S ribosomal protein L54, mitochondrial
Chain o
Ribosomal protein 63, mitochondrial
Chain r
39S ribosomal protein S18a, mitochondrial

Coloring options:

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