J3_6O3M_019

3D structure

PDB id

6O3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.97 Å

Loop

Sequence

CGUAAG*CGG*UCAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6O3M_019 not in the Motif Atlas

Homologous match to J3_7A0S_006

Geometric discrepancy: 0.119

The information below is about J3_7A0S_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.6

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

6O3M|1|RA|C|1298
6O3M|1|RA|G|1299
6O3M|1|RA|U|1300
6O3M|1|RA|A|1301
6O3M|1|RA|A|1302
6O3M|1|RA|G|1303
*
6O3M|1|RA|C|1625
6O3M|1|RA|G|1626
6O3M|1|RA|G|1627
*
6O3M|1|RA|U|1639
6O3M|1|RA|C|1640
6O3M|1|RA|A|1641
6O3M|1|RA|G|1642

Current chains

Chain RA

23S rRNA

Nearby chains