J3_6O3M_021

3D structure

PDB id

6O3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.97 Å

Loop

Sequence

GCGGGAC*GGCAG*CC

Length

14 nucleotides

Bulged bases

6O3M|1|RA|A|1384

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6O3M_021 not in the Motif Atlas

Homologous match to J3_7RQB_009

Geometric discrepancy: 0.117

The information below is about J3_7RQB_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_04858.2

Basepair signature

cWW-F-cWW-F-F-F-F-F-cWW

Number of instances in this motif group

3

Unit IDs

6O3M|1|RA|G|1344
6O3M|1|RA|C|1345
6O3M|1|RA|G|1346
6O3M|1|RA|G|1347
6O3M|1|RA|G|1348
6O3M|1|RA|A|1349
6O3M|1|RA|C|1350
*
6O3M|1|RA|G|1381
6O3M|1|RA|G|1382
6O3M|1|RA|C|1383
6O3M|1|RA|A|1384
6O3M|1|RA|G|1385
*
6O3M|1|RA|C|1402
6O3M|1|RA|C|1403

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RX

50S ribosomal protein L23