J3_6O8W_009
3D structure
- PDB id
- 6O8W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.53 Å
Loop
- Sequence
- CUC*GAG*CAGAAG
- Length
- 12 nucleotides
- Bulged bases
- 6O8W|1|A|G|2348
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6O8W_009 not in the Motif Atlas
- Homologous match to J3_7A0S_010
- Geometric discrepancy: 0.2306
- The information below is about J3_7A0S_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_05327.1
- Basepair signature
- cWW-tWH-tWW-cWW-F-cWW
- Number of instances in this motif group
- 10
Unit IDs
6O8W|1|A|C|2309
6O8W|1|A|U|2310
6O8W|1|A|C|2311
*
6O8W|1|A|G|2335
6O8W|1|A|A|2336
6O8W|1|A|G|2337
*
6O8W|1|A|C|2346
6O8W|1|A|A|2347
6O8W|1|A|G|2348
6O8W|1|A|A|2349
6O8W|1|A|A|2350
6O8W|1|A|G|2351
Current chains
- Chain A
- 50S subunit
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain F
- 50S ribosomal protein L5
- Chain P
- 50S ribosomal protein L18
- Chain X
- 50S ribosomal protein L27
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