J3_7A0S_010

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CUC*GAG*UAGAAG

Length

12 nucleotides

Bulged bases

7A0S|1|X|G|2313

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_61124.2

Basepair signature

cWW-tWH-tWW-cWW-F-cWW

Number of instances in this motif group

7

Unit IDs

7A0S|1|X|C|2274
7A0S|1|X|U|2275
7A0S|1|X|C|2276
*
7A0S|1|X|G|2300
7A0S|1|X|A|2301
7A0S|1|X|G|2302
*
7A0S|1|X|U|2311
7A0S|1|X|A|2312
7A0S|1|X|G|2313
7A0S|1|X|A|2314
7A0S|1|X|A|2315
7A0S|1|X|G|2316

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain D

50S ribosomal protein L5

Chain L

50S ribosomal protein L18

Chain T

50S ribosomal protein L27

Chain Y

5S ribosomal RNA; 5S rRNA