J3_6O90_008
3D structure
- PDB id
- 6O90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.49 Å
Loop
- Sequence
- UUG*CUAACC*GAGACAG
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6O90_008 not in the Motif Atlas
- Homologous match to J3_4WF9_007
- Geometric discrepancy: 0.1982
- The information below is about J3_4WF9_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_07703.1
- Basepair signature
- cWW-cWW-tSH-F-F-F-F-F-cWW-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
6O90|1|A|U|2105
6O90|1|A|U|2106
6O90|1|A|G|2107
*
6O90|1|A|C|2210
6O90|1|A|U|2211
6O90|1|A|A|2212
6O90|1|A|A|2213
6O90|1|A|C|2214
6O90|1|A|C|2215
*
6O90|1|A|G|2236
6O90|1|A|A|2237
6O90|1|A|G|2238
6O90|1|A|A|2239
6O90|1|A|C|2240
6O90|1|A|A|2241
6O90|1|A|G|2242
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain Y
- 50S ribosomal protein L28
Coloring options: