J3_6O90_022
3D structure
- PDB id
- 6O90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.49 Å
Loop
- Sequence
- UAU*AGAC*GGUG
- Length
- 11 nucleotides
- Bulged bases
- 6O90|1|a|U|1198
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6O90_022 not in the Motif Atlas
- Homologous match to J3_5J7L_010
- Geometric discrepancy: 0.2371
- The information below is about J3_5J7L_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82365.4
- Basepair signature
- cWW-F-cWW-cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
6O90|1|a|U|1132
6O90|1|a|A|1133
6O90|1|a|U|1134
*
6O90|1|a|A|1170
6O90|1|a|G|1171
6O90|1|a|A|1172
6O90|1|a|C|1173
*
6O90|1|a|G|1196
6O90|1|a|G|1197
6O90|1|a|U|1198
6O90|1|a|G|1199
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain i
- 30S ribosomal protein S9
- Chain n
- 30S ribosomal protein S14 type Z
Coloring options: