J3_6O90_030

3D structure

PDB id

6O90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

AUGCAUGCGAUUGGAAGUGCAUGUCC*GGGAGC*GCGAAGU

Length

39 nucleotides

Bulged bases

6O90|1|A|U|1487, 6O90|1|A|A|1495, 6O90|1|A|U|1496

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O90|1|A|A|1486
6O90|1|A|U|1487
6O90|1|A|G|1488
6O90|1|A|C|1489
6O90|1|A|A|1490
6O90|1|A|U|1491
6O90|1|A|G|1492
6O90|1|A|C|1493
6O90|1|A|G|1494
6O90|1|A|A|1495
6O90|1|A|U|1496
6O90|1|A|U|1497
6O90|1|A|G|1498
6O90|1|A|G|1499
6O90|1|A|A|1500
6O90|1|A|A|1501
6O90|1|A|G|1502
6O90|1|A|U|1503
6O90|1|A|G|1504
6O90|1|A|C|1505
6O90|1|A|A|1506
6O90|1|A|U|1507
6O90|1|A|G|1508
6O90|1|A|U|1509
6O90|1|A|C|1510
6O90|1|A|C|1511
*
6O90|1|A|G|1569
6O90|1|A|G|1570
6O90|1|A|G|1571
6O90|1|A|A|1572
6O90|1|A|G|1573
6O90|1|A|C|1574
*
6O90|1|A|G|1587
6O90|1|A|C|1588
6O90|1|A|G|1589
6O90|1|A|A|1590
6O90|1|A|A|1591
6O90|1|A|G|1592
6O90|1|A|U|1593

Current chains

Chain A

23S rRNA

Nearby chains

Chain O

50S ribosomal protein L17