J3_6OGG_029
3D structure
- PDB id
- 6OGG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GCA*UCAUAGUGAUCC*GCUCAAC
- Length
- 22 nucleotides
- Bulged bases
- 6OGG|1|1|A|2425, 6OGG|1|1|A|2426
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OGG|1|1|G|2282
6OGG|1|1|C|2283
6OGG|1|1|A|2284
*
6OGG|1|1|U|2384
6OGG|1|1|C|2385
6OGG|1|1|A|2386
6OGG|1|1|U|2387
6OGG|1|1|A|2388
6OGG|1|1|G|2389
6OGG|1|1|U|2390
6OGG|1|1|G|2391
6OGG|1|1|A|2392
6OGG|1|1|U|2393
6OGG|1|1|C|2394
6OGG|1|1|C|2395
*
6OGG|1|1|G|2421
6OGG|1|1|C|2422
6OGG|1|1|U|2423
6OGG|1|1|C|2424
6OGG|1|1|A|2425
6OGG|1|1|A|2426
6OGG|1|1|C|2427
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 5
- Transfer RNA; tRNA
- Chain C
- 50S ribosomal protein L33
- Chain E
- 50S ribosomal protein L35
- Chain l
- 50S ribosomal protein L15
- Chain w
- 50S ribosomal protein L27
Coloring options: