J3_6OGI_011

3D structure

PDB id

6OGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUGAC*GUCC*GAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OGI|1|1|C|2789
6OGI|1|1|U|2790
6OGI|1|1|G|2791
6OGI|1|1|A|2792
6OGI|1|1|C|2793
*
6OGI|1|1|G|2803
6OGI|1|1|U|2804
6OGI|1|1|C|2805
6OGI|1|1|C|2806
*
6OGI|1|1|G|2892
6OGI|1|1|A|2893
6OGI|1|1|G|2894

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain c

50S ribosomal protein L3