J3_6OGI_012
3D structure
- PDB id
- 6OGI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGAACG*CGUUGAU*AAUGAACC
- Length
- 21 nucleotides
- Bulged bases
- 6OGI|1|1|U|2833
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OGI|1|1|G|2811
6OGI|1|1|G|2812
6OGI|1|1|A|2813
6OGI|1|1|A|2814
6OGI|1|1|C|2815
6OGI|1|1|G|2816
*
6OGI|1|1|C|2830
6OGI|1|1|G|2831
6OGI|1|1|U|2832
6OGI|1|1|U|2833
6OGI|1|1|G|2834
6OGI|1|1|A|2835
6OGI|1|1|U|2836
*
6OGI|1|1|A|2882
6OGI|1|1|A|2883
6OGI|1|1|U|2884
6OGI|1|1|G|2885
6OGI|1|1|A|2886
6OGI|1|1|A|2887
6OGI|1|1|C|2888
6OGI|1|1|C|2889
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L32
- Chain c
- 50S ribosomal protein L3
- Chain n
- 50S ribosomal protein L17
- Chain s
- 50S ribosomal protein L22
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