J3_6OGI_029
3D structure
- PDB id
- 6OGI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CCCGCACAAG*CUAGUAA*UGAAUACGUUCCCGGG
- Length
- 33 nucleotides
- Bulged bases
- 6OGI|1|3|A|1346
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OGI|1|3|C|930
6OGI|1|3|C|931
6OGI|1|3|C|932
6OGI|1|3|G|933
6OGI|1|3|C|934
6OGI|1|3|A|935
6OGI|1|3|C|936
6OGI|1|3|A|937
6OGI|1|3|A|938
6OGI|1|3|G|939
*
6OGI|1|3|C|1344
6OGI|1|3|U|1345
6OGI|1|3|A|1346
6OGI|1|3|G|1347
6OGI|1|3|U|1348
6OGI|1|3|A|1349
6OGI|1|3|A|1350
*
6OGI|1|3|U|1372
6OGI|1|3|G|1373
6OGI|1|3|A|1374
6OGI|1|3|A|1375
6OGI|1|3|U|1376
6OGI|1|3|A|1377
6OGI|1|3|C|1378
6OGI|1|3|G|1379
6OGI|1|3|U|1380
6OGI|1|3|U|1381
6OGI|1|3|C|1382
6OGI|1|3|C|1383
6OGI|1|3|C|1384
6OGI|1|3|G|1385
6OGI|1|3|G|1386
6OGI|1|3|G|1387
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 4
- mRNA
- Chain 5
- Transfer RNA; tRNA
- Chain J
- 30S ribosomal protein S5
- Chain L
- 30S ribosomal protein S7
- Chain N
- 30S ribosomal protein S9
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