J3_6OIG_011
3D structure
- PDB id
- 6OIG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subunit joining exposes nascent pre-40S rRNA for processing and quality control
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- AUUG*CUUAUUC*GAAGACAUU
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OIG|1|5|A|2432
6OIG|1|5|U|2433
6OIG|1|5|U|2434
6OIG|1|5|G|2435
*
6OIG|1|5|C|2512
6OIG|1|5|U|2513
6OIG|1|5|U|2514
6OIG|1|5|A|2515
6OIG|1|5|U|2516
6OIG|1|5|U|2517
6OIG|1|5|C|2518
*
6OIG|1|5|G|2589
6OIG|1|5|A|2590
6OIG|1|5|A|2591
6OIG|1|5|G|2592
6OIG|1|5|A|2593
6OIG|1|5|C|2594
6OIG|1|5|A|2595
6OIG|1|5|U|2596
6OIG|1|5|U|2597
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain G
- 60S ribosomal protein L8-A
- Chain N
- 60S ribosomal protein L15-A
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