J3_6OIG_024
3D structure
- PDB id
- 6OIG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subunit joining exposes nascent pre-40S rRNA for processing and quality control
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAGAUGG*CGUUUCAAAGG*CACCAUC
- Length
- 25 nucleotides
- Bulged bases
- 6OIG|1|5|C|1556, 6OIG|1|5|A|1558
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OIG|1|5|G|1536
6OIG|1|5|A|1537
6OIG|1|5|G|1538
6OIG|1|5|A|1539
6OIG|1|5|U|1540
6OIG|1|5|G|1541
6OIG|1|5|G|1542
*
6OIG|1|5|C|1551
6OIG|1|5|G|1552
6OIG|1|5|U|1553
6OIG|1|5|U|1554
6OIG|1|5|U|1555
6OIG|1|5|C|1556
6OIG|1|5|A|1557
6OIG|1|5|A|1558
6OIG|1|5|A|1559
6OIG|1|5|G|1560
6OIG|1|5|G|1561
*
6OIG|1|5|C|1579
6OIG|1|5|A|1580
6OIG|1|5|C|1581
6OIG|1|5|C|1582
6OIG|1|5|A|1583
6OIG|1|5|U|1584
6OIG|1|5|C|1585
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain A
- 60S ribosomal protein L2-A
- Chain G
- 60S ribosomal protein L8-A
- Chain N
- 60S ribosomal protein L15-A
- Chain X
- 60S ribosomal protein L25
- Chain j
- 60S ribosomal protein L37-A
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