J3_6OLE_036
3D structure
- PDB id
- 6OLE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AGAUUAAG*CGCGC(A2M)AAUUA*UAGU
- Length
- 23 nucleotides
- Bulged bases
- 6OLE|1|S2|A|46, 6OLE|1|S2|U|487, 6OLE|1|S2|U|488
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OLE|1|S2|A|40
6OLE|1|S2|G|41
6OLE|1|S2|A|42
6OLE|1|S2|U|43
6OLE|1|S2|U|44
6OLE|1|S2|A|45
6OLE|1|S2|A|46
6OLE|1|S2|G|47
*
6OLE|1|S2|C|479
6OLE|1|S2|G|480
6OLE|1|S2|C|481
6OLE|1|S2|G|482
6OLE|1|S2|C|483
6OLE|1|S2|A2M|484
6OLE|1|S2|A|485
6OLE|1|S2|A|486
6OLE|1|S2|U|487
6OLE|1|S2|U|488
6OLE|1|S2|A|489
*
6OLE|1|S2|U|511
6OLE|1|S2|A|512
6OLE|1|S2|G|513
6OLE|1|S2|U|514
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SE
- 40S ribosomal protein S4, X isoform
- Chain SJ
- 40S ribosomal protein S9
- Chain SX
- 40S ribosomal protein S23
- Chain SY
- 40S ribosomal protein S24
Coloring options: