J3_6OLE_042

3D structure

PDB id

6OLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAGAAG*CC*GAAAAUCC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLE|1|t|G|2575
6OLE|1|t|G|2576
6OLE|1|t|A|2577
6OLE|1|t|G|2578
6OLE|1|t|A|2579
6OLE|1|t|A|2580
6OLE|1|t|G|2581
*
6OLE|1|t|C|2716
6OLE|1|t|C|2717
*
6OLE|1|t|G|2721
6OLE|1|t|A|2722
6OLE|1|t|A|2723
6OLE|1|t|A|2724
6OLE|1|t|A|2725
6OLE|1|t|U|2726
6OLE|1|t|C|2727
6OLE|1|t|C|2728

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain A

60S ribosomal protein L8

Chain h

60S ribosomal protein L34

Chain q

60S ribosomal protein L37a