J3_6OLE_044
3D structure
- PDB id
- 6OLE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UCGGUUGGCCUCGGAUAGCCGGU*GGUCCGGUGCGGAGUGCCCUUC*GCACCGCACGUUCGUG
- Length
- 61 nucleotides
- Bulged bases
- 6OLE|1|t|C|4718, 6OLE|1|t|C|4719, 6OLE|1|t|U|4725, 6OLE|1|t|U|4827, 6OLE|1|t|G|4828, 6OLE|1|t|G|4830, 6OLE|1|t|G|4833, 6OLE|1|t|U|4839, 6OLE|1|t|U|4840, 6OLE|1|t|A|4896, 6OLE|1|t|C|4898, 6OLE|1|t|A|4901, 6OLE|1|t|C|4902, 6OLE|1|t|U|4908
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OLE|1|t|U|4710
6OLE|1|t|C|4711
6OLE|1|t|G|4712
6OLE|1|t|G|4713
6OLE|1|t|U|4714
6OLE|1|t|U|4715
6OLE|1|t|G|4716
6OLE|1|t|G|4717
6OLE|1|t|C|4718
6OLE|1|t|C|4719
6OLE|1|t|U|4720
6OLE|1|t|C|4721
6OLE|1|t|G|4722
6OLE|1|t|G|4723
6OLE|1|t|A|4724
6OLE|1|t|U|4725
6OLE|1|t|A|4726
6OLE|1|t|G|4727
6OLE|1|t|C|4728
6OLE|1|t|C|4729
6OLE|1|t|G|4730
6OLE|1|t|G|4731
6OLE|1|t|U|4732
*
6OLE|1|t|G|4820
6OLE|1|t|G|4821
6OLE|1|t|U|4822
6OLE|1|t|C|4823
6OLE|1|t|C|4824
6OLE|1|t|G|4825
6OLE|1|t|G|4826
6OLE|1|t|U|4827
6OLE|1|t|G|4828
6OLE|1|t|C|4829
6OLE|1|t|G|4830
6OLE|1|t|G|4831
6OLE|1|t|A|4832
6OLE|1|t|G|4833
6OLE|1|t|U|4834
6OLE|1|t|G|4835
6OLE|1|t|C|4836
6OLE|1|t|C|4837
6OLE|1|t|C|4838
6OLE|1|t|U|4839
6OLE|1|t|U|4840
6OLE|1|t|C|4841
*
6OLE|1|t|G|4894
6OLE|1|t|C|4895
6OLE|1|t|A|4896
6OLE|1|t|C|4897
6OLE|1|t|C|4898
6OLE|1|t|G|4899
6OLE|1|t|C|4900
6OLE|1|t|A|4901
6OLE|1|t|C|4902
6OLE|1|t|G|4903
6OLE|1|t|U|4904
6OLE|1|t|U|4905
6OLE|1|t|C|4906
6OLE|1|t|G|4907
6OLE|1|t|U|4908
6OLE|1|t|G|4909
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain G
- 60S ribosomal protein L6
- Chain J
- 60S ribosomal protein L9
- Chain N
- 60S ribosomal protein L14
- Chain P
- 60S ribosomal protein L13a
- Chain T
- 60S ribosomal protein L18a
- Chain g
- 60S ribosomal protein L35a
Coloring options: