J3_6OLE_045
3D structure
- PDB id
- 6OLE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUAGCCCCGAAGGUAGAGCAG*CGUGUCCU*GUC
- Length
- 32 nucleotides
- Bulged bases
- 6OLE|1|v|G|18, 6OLE|1|v|G|19, 6OLE|1|v|U|47
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OLE|1|v|G|7
6OLE|1|v|U|8
6OLE|1|v|A|9
6OLE|1|v|G|10
6OLE|1|v|C|11
6OLE|1|v|C|12
6OLE|1|v|C|13
6OLE|1|v|C|14
6OLE|1|v|G|15
6OLE|1|v|A|16
6OLE|1|v|A|17
6OLE|1|v|G|18
6OLE|1|v|G|19
6OLE|1|v|U|20
6OLE|1|v|A|21
6OLE|1|v|G|22
6OLE|1|v|A|23
6OLE|1|v|G|24
6OLE|1|v|C|25
6OLE|1|v|A|26
6OLE|1|v|G|27
*
6OLE|1|v|C|43
6OLE|1|v|G|44
6OLE|1|v|U|45
6OLE|1|v|G|46
6OLE|1|v|U|47
6OLE|1|v|C|48
6OLE|1|v|C|49
6OLE|1|v|U|50
*
6OLE|1|v|G|65
6OLE|1|v|U|66
6OLE|1|v|C|67
Current chains
- Chain v
- PE RNA
Nearby chains
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain p
- 60S ribosomal protein L36a
- Chain t
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: