J3_6OLF_037

3D structure

PDB id

6OLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGGA*UUUGUC*GAUAA

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLF|1|S2|U|1350
6OLF|1|S2|G|1351
6OLF|1|S2|G|1352
6OLF|1|S2|A|1353
*
6OLF|1|S2|U|1358
6OLF|1|S2|U|1359
6OLF|1|S2|U|1360
6OLF|1|S2|G|1361
6OLF|1|S2|U|1362
6OLF|1|S2|C|1363
*
6OLF|1|S2|G|1375
6OLF|1|S2|A|1376
6OLF|1|S2|U|1377
6OLF|1|S2|A|1378
6OLF|1|S2|A|1379

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SA

40S ribosomal protein SA

Chain SC

40S ribosomal protein S2

Chain SR

40S ribosomal protein S17

Chain SV

40S ribosomal protein S21