J3_6OLF_042

3D structure

PDB id

6OLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UU*AGAAGC*GGUGGA

Length

14 nucleotides

Bulged bases

6OLF|1|t|A|1787, 6OLF|1|t|G|1816

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLF|1|t|U|1708
6OLF|1|t|U|1709
*
6OLF|1|t|A|1784
6OLF|1|t|G|1785
6OLF|1|t|A|1786
6OLF|1|t|A|1787
6OLF|1|t|G|1788
6OLF|1|t|C|1789
*
6OLF|1|t|G|1813
6OLF|1|t|G|1814
6OLF|1|t|U|1815
6OLF|1|t|G|1816
6OLF|1|t|G|1817
6OLF|1|t|A|1818

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain H

60S ribosomal protein L7

Chain U

60S ribosomal protein L21

Chain c

60S ribosomal protein L29