J3_6OLG_011

3D structure

PDB id

6OLG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLG|1|A2|A|2530
6OLG|1|A2|G|2531
6OLG|1|A2|A|2532
6OLG|1|A2|U|2533
6OLG|1|A2|G|2534
*
6OLG|1|A2|C|2551
6OLG|1|A2|A|2552
6OLG|1|A2|G|2553
6OLG|1|A2|U|2554
*
6OLG|1|A2|A|2736
6OLG|1|A2|G|2737
6OLG|1|A2|G|2738
6OLG|1|A2|G|2739
6OLG|1|A2|U|2740
6OLG|1|A2|G|2741
6OLG|1|A2|U|2742
6OLG|1|A2|A|2743
6OLG|1|A2|A|2744
6OLG|1|A2|A|2745
6OLG|1|A2|U|2746

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AZ

60S ribosomal protein L27