J3_6OLG_013
3D structure
- PDB id
- 6OLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CGG*CUGAC*GGACAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6OLG_013 not in the Motif Atlas
- Geometric match to J3_8VTW_006
- Geometric discrepancy: 0.1352
- The information below is about J3_8VTW_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_89368.4
- Basepair signature
- cWW-tSH-tHW-F-cWW-tHH-cWW
- Number of instances in this motif group
- 3
Unit IDs
6OLG|1|A2|C|3908
6OLG|1|A2|G|3909
6OLG|1|A2|G|3910
*
6OLG|1|A2|C|4044
6OLG|1|A2|U|4045
6OLG|1|A2|G|4046
6OLG|1|A2|A|4047
6OLG|1|A2|C|4048
*
6OLG|1|A2|G|4130
6OLG|1|A2|G|4131
6OLG|1|A2|A|4132
6OLG|1|A2|C|4133
6OLG|1|A2|A|4134
6OLG|1|A2|G|4135
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AA
- 60S ribosomal protein L8
- Chain AG
- 60S ribosomal protein L7a
- Chain AN
- 60S ribosomal protein L15
- Chain Ai
- 60S ribosomal protein L36
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