J3_6OLG_015
3D structure
- PDB id
- 6OLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUC*GAG*CAAAAG
- Length
- 12 nucleotides
- Bulged bases
- 6OLG|1|A2|A|4242, 6OLG|1|A2|A|4244
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6OLG_015 not in the Motif Atlas
- Homologous match to J3_8C3A_010
- Geometric discrepancy: 0.1264
- The information below is about J3_8C3A_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_91491.5
- Basepair signature
- cWW-F-tWW-tHW-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
6OLG|1|A2|C|4203
6OLG|1|A2|U|4204
6OLG|1|A2|C|4205
*
6OLG|1|A2|G|4229
6OLG|1|A2|A|4230
6OLG|1|A2|G|4231
*
6OLG|1|A2|C|4240
6OLG|1|A2|A|4241
6OLG|1|A2|A|4242
6OLG|1|A2|A|4243
6OLG|1|A2|A|4244
6OLG|1|A2|G|4245
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain A4
- 5S ribosomal RNA; 5S rRNA
- Chain AD
- 60S ribosomal protein L5
- Chain AJ
- 60S ribosomal protein L11
- Chain AT
- 60S ribosomal protein L21
- Chain Bv
- Transfer RNA; tRNA
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