#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6 7break 8 9 101-31-103-63-94-57-8
1 J3_5J7L_0455J7L0.22662DA LSU rRNAC2332A2333A2335G2337*C2295U2296A2297*U2321A2322G2323cWWtHWtWWcWWcWW
2 J3_8VTW_0078VTW0.169321A LSU rRNAU2332A2333A2335G2337*C2295U2296C2297*G2321A2322G2323ncSscWWtHWtWWcWWcWW
3 J3_4WF9_0084WF90.12132X LSU rRNAC2359A2360A2362G2364*C2322U2323C2324*G2348A2349G2350cWWtHWtWWcWWcWW
4 J3_4V9F_0084V9F0.000020 LSU rRNAC2366A2367A2369G2371*C2329U2330C2331*G2355A2356G2357cWWtHWtWWcWWcWW
5 J3_5TBW_0135TBW0.154821 LSU rRNAU2701A2702A2704G2706*C2664U2665C2666*G2690A2691A2692ncSscWWtHWtWWcWWcWW
6 J3_8C3A_0108C3A0.184621 LSU rRNAU2673A2674A2676G2678*C2636U2637C2638*G2662A2663A2664cWWtHWntWWcWWcWW
7 J3_7A0S_0107A0S0.26702X LSU rRNAU2311A2312A2314G2316*C2274U2275C2276*G2300A2301G2302cWWncWBcWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUC*GAG*UAGAAG2
CUC*GAA*UAAAAG2
CUA*UAG*CAUAAG1
CUC*GAG*CAUAAG1
CUC*GAG*CAAAAG1
Non-Watson-Crick part of the motif
SequenceCounts
U*A*AAAA3
U*A*AUAA2
U*A*AGAA2

Release history

Release3.873.883.89
Date2024-08-142024-09-112024-10-09
StatusUpdated, 1 parentExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (7)
  • Basepair signature
    cWW-F-tWW-tHW-cWW-F-cWW
    Heat map statistics
    Min 0.12 | Avg 0.19 | Max 0.30
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