J3_6OLZ_017
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUC*GAG*CAAAAG
- Length
- 12 nucleotides
- Bulged bases
- 6OLZ|1|A2|A|4242
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6OLZ_017 not in the Motif Atlas
- Homologous match to J3_8C3A_010
- Geometric discrepancy: 0.1955
- The information below is about J3_8C3A_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_91491.5
- Basepair signature
- cWW-F-tWW-tHW-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
6OLZ|1|A2|C|4203
6OLZ|1|A2|U|4204
6OLZ|1|A2|C|4205
*
6OLZ|1|A2|G|4229
6OLZ|1|A2|A|4230
6OLZ|1|A2|G|4231
*
6OLZ|1|A2|C|4240
6OLZ|1|A2|A|4241
6OLZ|1|A2|A|4242
6OLZ|1|A2|A|4243
6OLZ|1|A2|A|4244
6OLZ|1|A2|G|4245
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain A4
- 5S ribosomal RNA; 5S rRNA
- Chain AD
- 60S ribosomal protein L5
- Chain AJ
- 60S ribosomal protein L11
- Chain AT
- 60S ribosomal protein L21
- Chain Bv
- Transfer RNA; tRNA
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