J3_6OLZ_026
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CCG*UUCCG*CAAAG
- Length
- 13 nucleotides
- Bulged bases
- 6OLZ|1|B1|C|1138, 6OLZ|1|B1|A|1150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6OLZ_026 not in the Motif Atlas
- Homologous match to J3_8P9A_075
- Geometric discrepancy: 0.5993
- The information below is about J3_8P9A_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_94999.1
- Basepair signature
- cWW-tWW-cWW-tWW-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
6OLZ|1|B1|C|1094
6OLZ|1|B1|C|1095
6OLZ|1|B1|G|1096
*
6OLZ|1|B1|U|1136
6OLZ|1|B1|U|1137
6OLZ|1|B1|C|1138
6OLZ|1|B1|C|1139
6OLZ|1|B1|G|1140
*
6OLZ|1|B1|C|1147
6OLZ|1|B1|A|1148
6OLZ|1|B1|A|1149
6OLZ|1|B1|A|1150
6OLZ|1|B1|G|1151
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BA
- 40S ribosomal protein SA
- Chain BN
- 40S ribosomal protein S13
- Chain BV
- 40S ribosomal protein S21
- Chain BW
- 40S ribosomal protein S15a
- Chain Ba
- 40S ribosomal protein S26
- Chain Bb
- 40S ribosomal protein S27
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