J3_6OLZ_031
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UCUUAG*CGAGACU*AGCAAUA
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6OLZ_031 not in the Motif Atlas
- Geometric match to J3_4LFB_007
- Geometric discrepancy: 0.3767
- The information below is about J3_4LFB_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_01343.1
- Basepair signature
- cWW-tSS-F-F-tWH-F-F-cWW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
6OLZ|1|B1|U|1340
6OLZ|1|B1|C|1341
6OLZ|1|B1|U|1342
6OLZ|1|B1|U|1343
6OLZ|1|B1|A|1344
6OLZ|1|B1|G|1345
*
6OLZ|1|B1|C|1384
6OLZ|1|B1|G|1385
6OLZ|1|B1|A|1386
6OLZ|1|B1|G|1387
6OLZ|1|B1|A|1388
6OLZ|1|B1|C|1389
6OLZ|1|B1|U|1390
*
6OLZ|1|B1|A|1480
6OLZ|1|B1|G|1481
6OLZ|1|B1|C|1482
6OLZ|1|B1|A|1483
6OLZ|1|B1|A|1484
6OLZ|1|B1|U|1485
6OLZ|1|B1|A|1486
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BC
- 40S ribosomal protein S2
- Chain BD
- 40S ribosomal protein S3
- Chain BQ
- 40S ribosomal protein S16
- Chain BR
- 40S ribosomal protein S17
- Chain BU
- 40S ribosomal protein S20
- Chain Bd
- 40S ribosomal protein S29
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