3D structure

PDB id
6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GCGCAGUCC*GUGCG*CGACGUC
Length
21 nucleotides
Bulged bases
6OM7|1|t|G|447, 6OM7|1|t|U|448
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OM7|1|t|G|442
6OM7|1|t|C|443
6OM7|1|t|G|444
6OM7|1|t|C|445
6OM7|1|t|A|446
6OM7|1|t|G|447
6OM7|1|t|U|448
6OM7|1|t|C|449
6OM7|1|t|C|450
*
6OM7|1|t|G|692
6OM7|1|t|U|693
6OM7|1|t|G|694
6OM7|1|t|C|695
6OM7|1|t|G|696
*
6OM7|1|t|C|1275
6OM7|1|t|G|1276
6OM7|1|t|A|1277
6OM7|1|t|C|1278
6OM7|1|t|G|1279
6OM7|1|t|U|1280
6OM7|1|t|C|1281

Current chains

Chain t
28S ribosomal RNA

Nearby chains

Chain G
60S ribosomal protein L6
Chain f
60S ribosomal protein L32
Chain g
60S ribosomal protein L35a

Coloring options:

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