J3_6OM7_018

3D structure

PDB id

6OM7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUCUCC*GGCG*CGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM7|1|t|C|1082
6OM7|1|t|U|1083
6OM7|1|t|C|1084
6OM7|1|t|U|1085
6OM7|1|t|C|1086
6OM7|1|t|C|1087
*
6OM7|1|t|G|1148
6OM7|1|t|G|1149
6OM7|1|t|C|1150
6OM7|1|t|G|1151
*
6OM7|1|t|C|1176
6OM7|1|t|G|1177
6OM7|1|t|G|1178
6OM7|1|t|G|1179

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain F

60S ribosomal protein L5