J3_6OM7_025

3D structure

PDB id

6OM7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

6OM7|1|t|G|2741

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM7|1|t|A|2530
6OM7|1|t|G|2531
6OM7|1|t|A|2532
6OM7|1|t|U|2533
6OM7|1|t|G|2534
*
6OM7|1|t|C|2551
6OM7|1|t|A|2552
6OM7|1|t|G|2553
6OM7|1|t|U|2554
*
6OM7|1|t|A|2736
6OM7|1|t|G|2737
6OM7|1|t|G|2738
6OM7|1|t|G|2739
6OM7|1|t|U|2740
6OM7|1|t|G|2741
6OM7|1|t|U|2742
6OM7|1|t|A|2743
6OM7|1|t|A|2744
6OM7|1|t|A|2745
6OM7|1|t|U|2746

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain a

60S ribosomal protein L27