J3_6OM7_048
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGGGGCGAGCCC*GGGCUCUCGCUUCUGGCGCCAAG*CGAC
- Length
- 39 nucleotides
- Bulged bases
- 6OM7|1|t|G|4069, 6OM7|1|t|C|4079, 6OM7|1|t|C|4083, 6OM7|1|t|C|4085, 6OM7|1|t|U|4086, 6OM7|1|t|U|4087, 6OM7|1|t|C|4088, 6OM7|1|t|U|4089, 6OM7|1|t|G|4090
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OM7|1|t|G|4061
6OM7|1|t|G|4062
6OM7|1|t|G|4063
6OM7|1|t|G|4064
6OM7|1|t|G|4065
6OM7|1|t|C|4066
6OM7|1|t|G|4067
6OM7|1|t|A|4068
6OM7|1|t|G|4069
6OM7|1|t|C|4070
6OM7|1|t|C|4071
6OM7|1|t|C|4072
*
6OM7|1|t|G|4076
6OM7|1|t|G|4077
6OM7|1|t|G|4078
6OM7|1|t|C|4079
6OM7|1|t|U|4080
6OM7|1|t|C|4081
6OM7|1|t|U|4082
6OM7|1|t|C|4083
6OM7|1|t|G|4084
6OM7|1|t|C|4085
6OM7|1|t|U|4086
6OM7|1|t|U|4087
6OM7|1|t|C|4088
6OM7|1|t|U|4089
6OM7|1|t|G|4090
6OM7|1|t|G|4091
6OM7|1|t|C|4092
6OM7|1|t|G|4093
6OM7|1|t|C|4094
6OM7|1|t|C|4095
6OM7|1|t|A|4096
6OM7|1|t|A|4097
6OM7|1|t|G|4098
*
6OM7|1|t|C|4117
6OM7|1|t|G|4118
6OM7|1|t|A|4119
6OM7|1|t|C|4120
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain I
- 60S ribosomal protein L7a
- Chain SB
- 40S ribosomal protein S3a
- Chain Y
- 60S ribosomal protein L23a
- Chain a
- 60S ribosomal protein L27
- Chain d
- 60S ribosomal protein L30
- Chain h
- 60S ribosomal protein L34
- Chain q
- 60S ribosomal protein L37a
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