J3_6OM7_050
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UCGGUUG*CCCUUC*GCACCGCACGUUCGUG
- Length
- 29 nucleotides
- Bulged bases
- 6OM7|1|t|U|4839, 6OM7|1|t|U|4840, 6OM7|1|t|A|4896, 6OM7|1|t|C|4898, 6OM7|1|t|A|4901, 6OM7|1|t|C|4902, 6OM7|1|t|U|4908
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OM7|1|t|U|4710
6OM7|1|t|C|4711
6OM7|1|t|G|4712
6OM7|1|t|G|4713
6OM7|1|t|U|4714
6OM7|1|t|U|4715
6OM7|1|t|G|4716
*
6OM7|1|t|C|4836
6OM7|1|t|C|4837
6OM7|1|t|C|4838
6OM7|1|t|U|4839
6OM7|1|t|U|4840
6OM7|1|t|C|4841
*
6OM7|1|t|G|4894
6OM7|1|t|C|4895
6OM7|1|t|A|4896
6OM7|1|t|C|4897
6OM7|1|t|C|4898
6OM7|1|t|G|4899
6OM7|1|t|C|4900
6OM7|1|t|A|4901
6OM7|1|t|C|4902
6OM7|1|t|G|4903
6OM7|1|t|U|4904
6OM7|1|t|U|4905
6OM7|1|t|C|4906
6OM7|1|t|G|4907
6OM7|1|t|U|4908
6OM7|1|t|G|4909
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain G
- 60S ribosomal protein L6
- Chain N
- 60S ribosomal protein L14
- Chain P
- 60S ribosomal protein L13a
- Chain g
- 60S ribosomal protein L35a
Coloring options: