J3_6OM7_051
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- ACGCAGCUAGCU*AUU*ACACU
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6OM7_051 not in the Motif Atlas
- Geometric match to J3_4WF9_001
- Geometric discrepancy: 0.2468
- The information below is about J3_4WF9_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_47707.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-cWW-F-F-cSH-cSH-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
6OM7|1|D|A|44
6OM7|1|D|C|45
6OM7|1|D|G|46
6OM7|1|D|C|47
6OM7|1|D|A|48
6OM7|1|D|G|49
6OM7|1|D|C|50
6OM7|1|D|U|51
6OM7|1|D|A|52
6OM7|1|D|G|53
6OM7|1|D|C|54
6OM7|1|D|U|55
*
6OM7|1|D|A|62
6OM7|1|D|U|63
6OM7|1|D|U|64
*
6OM7|1|D|A|95
6OM7|1|D|C|96
6OM7|1|D|A|97
6OM7|1|D|C|98
6OM7|1|D|U|99
Current chains
- Chain D
- 5.8S ribosomal RNA
Nearby chains
- Chain Y
- 60S ribosomal protein L23a
- Chain i
- 60S ribosomal protein L35
- Chain k
- 60S ribosomal protein L37
- Chain m
- 60S ribosomal protein L39
- Chain t
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: