J3_6ORD_035

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6ORD_035 not in the Motif Atlas

Homologous match to J3_4LFB_005

Geometric discrepancy: 0.1695

The information below is about J3_4LFB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_82572.1

Basepair signature

cWW-tSH-tWW-F-cWW-tHW-F-F-cWW

Number of instances in this motif group

2

Unit IDs

6ORD|1|XA|C|990
6ORD|1|XA|U|991
6ORD|1|XA|U|992
6ORD|1|XA|G|993
*
6ORD|1|XA|C|1045
6ORD|1|XA|A|1046
6ORD|1|XA|G|1047
*
6ORD|1|XA|C|1210
6ORD|1|XA|U|1211
6ORD|1|XA|U|1212
6ORD|1|XA|A|1213
6ORD|1|XA|C|1214
6ORD|1|XA|G|1215

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XN

30S ribosomal protein S14 type Z